STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azo2185Conserved hypothetical membrane protein. Homology to NMA1807 of Neisseria meningitidis of 41% (trembl|Q9JTE8(SRS)). No domains predicted. TMHMM reporting 2 TMH present. NO Signal Peptide being reported present; Conserved hypothetical protein. (75 aa)    
Predicted Functional Partners:
yaiE
Conserved hypothetical protein; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.
       0.818
argG
ArgG protein; Argininosuccinate synthase, argG. Similar to SWISSPROT:ASSY_NITEU (81%). Argininosuccinate synthase is a urea cycle enzyme that catalyzes the penultimate step in arginine biosynthesis: the ATP-dependent ligation of citrulline to aspartate to form argininosuccinate, AMP and pyrophosphate. InterPro (PF00764): Argininosuccinate synthase InterPro (TIGR00032): Argininosuccinate synthase; High confidence in function and specificity.
       0.797
azo2183
Conserved hypothetical protein, 57% identity(77% Similarity) to SwissProt;Q8XWC5. SwissProt;Q82SQ9(60% identity) Has (IPR007551)PF04461, Protein of unknown function (DUF520);Family of uncharacterised proteins. Signal Peptide or TMH not present; Specificity unclear; Belongs to the UPF0234 family.
       0.782
azo2182
Conserved hypothetical protein. Homology to ebA5103 of Azoarcus sp. EbN1 of 57% (gnl|keqq|eba:ebA5103(KEGG)). no domains predicted. no signal peptide. no TMHs.
       0.649
argF
ArgF protein; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
       0.647
argD
Probable acetylornithine aminotransferase (EC 2.6.1.11) (ACOAT). Homology to argD of Anavaena sp. of 46% (sprot|ARGD_ANASP). Involved in both the arginine and lysine biosynthetic pathways. Tigrfam: argD: acetylornithine and succinylornithine aminotransferases Pfam: Aminotransferase class-III; High confidence in function and specificity.
       0.599
azo2181
Conserved hypothetical secreted protein. Homology to pa4048 of P. aeruginosa of 33% (trembl|Q9HWY0). no domains. signal peptide. no TMHs; Conserved hypothetical protein.
 
     0.554
azo1011
Conserved hypothetical secreted protein. Homology to Rgel02001790 of Rubrivivax gelatinosus of 45% (gi|47573892|ref|ZP_00243929.1|(NBCI ENTREZ)). No domains predicted. No TMHs. Signal peptide present; Conserved hypothetical protein.
  
     0.541
azo0910
Conserved hypothetical protein. Homology to ebD81 Azoarcus sp. EbN1 of 64% (gnl|keqq|eba:ebD81(KEGG)). No domains predicted. No signal peptid. No TMHs.
  
     0.536
ccoQ
Cbb3-type cytochrome oxidase, subunit ccoQ, 44% Identity to TrEMBL;Q8D9I3, Q7MKV5,Q9KS21. Has PF05545,Cbb3-type cytochrome oxidase component FixQ; IPR008621;This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was firs [...]
  
     0.536
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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