STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azo2189Conserved hypothetical protein. Homology to bpp2544 of P. pararpertussis of 51% (TREMBL:Q7W7H5). no signal peptide. no TMHs. No domains predicted. (94 aa)    
Predicted Functional Partners:
azo3163
Conserved hypothetical membrane protein. Homology to bb2106 of B. bronchispetica of 55% (trembl|Q7WKK0(SRS)). No domains predicted. signal peptide. 2 TMHs; Conserved hypothetical protein.
  
     0.711
gshA
GshA protein; Glutamate--cysteine ligase. Glutathione metabolism; High confidence in function and specificity.
  
     0.710
azo1434
Hypothetical protein similar by 78% to RSc1001 [RS04291] [Ralstonia solanacearum(Pseudomonas solanacearum)].TrEMBL Q8Y0P2. No Signal Peptide Reported No TMH Reported.
  
     0.662
azo3439
Conserved hypothetical protein. Homology to ebB122 of Azoarcus sp. EbN1 of 65% (gnl|keqq|eba:ebB122(KEGG)). No domains predicted. NO signal peptide present. No TMH present.
  
     0.631
sdhD
Succinate dehydrogenase, hydrophobic membrane anchor subunit. Homology to sdhD of C. burnetii of 41% (sprot|DHSD_COXBU). THIS IS THE HYDROPHOBIC COMPONENT OF THE SUCCINATE DEHYDROGENASE COMPLEX. IT IS SUGGESTED THAT IT IS REQUIRED TO ANCHOR THE CATALYTIC COMPONENTS TO THE CYTOPLASMIC MEMBRANE. no signal peptide 3 TMHS; Family membership.
  
     0.590
azo0789
Probable phasin. Homology to p8 of Sphingomonas sp. A1 of 69% (gi|51773776|dbj|BAD38885.1|(NBCI ENTREZ)). No domains predicted. No TMHs. No signal peptide; Family membership.
  
     0.579
azo3815
Probable phasin. Homology to p8 of Sphingomonas sp. A1 of 49% (gi|51773776|dbj|BAD38885.1|(NBCI ENTREZ)). No domains predicted. No TMHs. No signal peptide.,; Function unclear.
  
     0.570
argF
ArgF protein; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
       0.526
azo2185
Conserved hypothetical membrane protein. Homology to NMA1807 of Neisseria meningitidis of 41% (trembl|Q9JTE8(SRS)). No domains predicted. TMHMM reporting 2 TMH present. NO Signal Peptide being reported present; Conserved hypothetical protein.
 
     0.504
azo0737
Conserved hypothetical secreted protein. Homology to cv3590 of C. violaceum of 39% (trembl|Q7NS37(SRS)) no domains predicted signal peptide no TMHs; Conserved hypothetical protein.
  
     0.502
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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