STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azo2244Hypothetical secreted protein. No homology to the data bank. No domains pedicted. No TMHs signal peptide. (138 aa)    
Predicted Functional Partners:
azo2243
Conserved hypothetical secreted protein. Homology to TdenA01000001 of Thiobacillus denitrificans of 33% (gi|52007706|ref|ZP_00335083.1|(NBCI ENTREZ)). no domains predicted. signal peptide. no TMHs; Conserved hypothetical protein.
       0.773
azo2245
Hypothetical secreted protein. No good homology to the data bank. No domains predicted. No TMHs. Signal peptide present.
       0.625
gumB
Putative capsule polysaccharide export protein precursor.May be involved in polysaccharide polymerization or transport. 36% Poly_export. Pfam:PF02563; Poly_export; 1. Signal peptide: present; Family membership.
       0.613
gumC
Putative exopolysaccharide biosynthesis protein; 21% LPS_Wzz_MPA. Pfam:PF02706; Wzz; 1. TMhelix:1. Signal peptide:present; High confidence in function and specificity.
       0.596
eglA
Putative endoglucanase precursor; 41% Glyco_hydro_5. Pfam:PF00150; Cellulase; 1. Signal peptide: present; High confidence in function and specificity; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
       0.499
gumH
Putative glycosyltransferase; 60% Glyco_trans_1. Pfam:PF00534; Glycos_transf_1; 1; Specificity unclear.
       0.499
gumE
Putative surface polysaccharide polymerase; 26%; Family membership.
       0.499
gumF
Putative acetyltransferase; 44% Acyl_transf_3. Pfam:PF01757; Acyl_transf_3; 1. TMhelix:9. Non-secretory protein; High confidence in function and specificity.
       0.499
wzc1
Tyrosine-protein kinase wzc (EC 2.7.10.1). Required for the extracellular polysaccharide colanic acid synthesis. The autophosphorylated form is inactive. Probably involved in the export of colanic acid from the cell to medium (By similarity). gidA: glucose-inhibited division prot; High confidence in function and specificity.
       0.499
gumK
Putative glucuronyl transferase; 64%; High confidence in function and specificity.
       0.443
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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