STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azo2271Conserved hypothetical protein. Homology to Daro03003250 of Dechloromonas aromatica of 32% (gi|41723264|ref|ZP_00150207.1|(NBCI ENTREZ)). No domains predicted. No signal peptide. No TMHs. (286 aa)    
Predicted Functional Partners:
azo0894
GAF-domain containing protein,; Conserved hypothetical protein.
  
     0.762
azo0906
Conserved hypothetical signal transduction protein. Homology to Daro03002984 of Dechloromonas aromatica of 39% (gi|53729872|ref|ZP_00150342.2|(NBCI ENTREZ)). No domains predicted. No signal peptide. No TMHs; Conserved hypothetical protein.
  
     0.745
azo2779
Conserved hypothetical protein with unknown function. No domains predicted. Similarity to TREMBL: trembl|Q9I6D7 (33% Pseudomonas aeruginosa, hypothetical protein pa0356) / trembl|Q88CQ4 (30% Pseudomonas putida (strain KT2440), pp5126).
  
     0.743
fleN
Hypothetical flagellar related protein FleN. Homology to fleN of Pseudomonas fluorescens of 27% (AAN03366). No domains predicted. No signal peptide. No TMHs.
 
     0.741
azo3166
Hypothetical Protein,20% identity to TrEMBL;Q9HUK7. Very Bad homology with the hits in the DB over entire length of protein. No substantial good hits available. No signal peptide or TMH reported present.
  
     0.697
azo0166
Conserved hypothetical protein. Homology to ebA3023 of Azoarcus sp. EbN1 of 61% (trembl:Q5P4D4). No domains predicted. No TMHs. No signal peptide.
  
     0.639
azo3180
Putative response regulator protein,; Family membership.
  
  
  0.631
azo2482
Putative hybrid sensor and regulator; Gene function unknown, no significant homology to proteins of known function. Typical domains for hybrid sensor and regulator are found. InterPro: IPR003594 ATPbind_ATPase. IPR004358 Bact_sens_pr_C. IPR005467 His_kinase. IPR003661 His_kinA_N. IPR001789 Response_reg. IPR008207 Hpt. IPR000014 PAS_domain. IPR001610 PAC. Pfam: PF00072 Response_reg. PF02518 HATPase_c. PF00512 HisKA. PF00989 PAS. PF00785 PAC. SMART: SM00387 HATPase_c. SM00388 HisKA. SM00448 REC. SM00091 PAS SM00086 PAC. TIGRFAM: TIGR00229 PAS domain S-box. Signal P reporting signal pepti [...]
 
 
 0.610
barA
Putative sensor-regulator protein,; Specificity unclear.
 
 
 0.601
azo3182
Conserved hypothetical protein. Homology to Daro03003801 of Dechloromonas aromatica of 44% (gi|41722610|ref|ZP_00149605.1|(NBCI ENTREZ)). No domains predicted. No signal peptide. No TMHs.
  
     0.579
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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