Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
waaC1Lipopolysaccharide heptosyltransferase I; High confidence in function and specificity. (358 aa)    
Predicted Functional Partners:
azo2322
Glycosyltransferase; Hypothetical glycosyl transferase MJ1607 (EC 2.-.-.-). InterPro: Glycosyl transferases group 1; Specificity unclear.
 
 
 0.930
waaA
3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.
  
 0.928
azo1721
Heptosyltransferase; Similar to waaQ; Family membership.
 
 
 0.829
azo2323
Glycosyltransferase; Lipopolysaccharide core biosynthesis glycosyl transferase lpsE (EC 2.-.-.-); Specificity unclear.
 
 
 0.828
waaE2
ADP-heptose synthase (EC 2.7.-.-); High confidence in function and specificity.
 
  
 0.827
waaE1
ADP-heptose synthase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose.
 
  
 0.824
azo2324
Putative polysaccharide deacetylase; 29% Polysac_deacet. Pfam:PF01522; Polysacc_deac_1; 1; High confidence in function and specificity.
 
     0.793
waaF2
ADP-heptose--LPS heptosyltransferase II (EC 2.-.-.-); High confidence in function and specificity.
 
 
0.762
azo2315
Conserved hypothetical tyrosine/serine phosphatase,; Conserved hypothetical protein.
   
   0.748
azo1807
Heptose phosphatase; Hypothetical protein yaeD; High confidence in function and specificity.
  
 0.747
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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