STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azo2324Putative polysaccharide deacetylase; 29% Polysac_deacet. Pfam:PF01522; Polysacc_deac_1; 1; High confidence in function and specificity. (279 aa)    
Predicted Functional Partners:
azo2323
Glycosyltransferase; Lipopolysaccharide core biosynthesis glycosyl transferase lpsE (EC 2.-.-.-); Specificity unclear.
 
     0.860
azo2322
Glycosyltransferase; Hypothetical glycosyl transferase MJ1607 (EC 2.-.-.-). InterPro: Glycosyl transferases group 1; Specificity unclear.
     0.820
waaC1
Lipopolysaccharide heptosyltransferase I; High confidence in function and specificity.
 
     0.793
azo2325
Conserved hypothetical protein. Homology to CV1439 of Chromobacterium violaceum of 58% (trembl:Q7NY36). No domains predicted. No TMHs. No signal peptide.
       0.752
ndvB
Beta-(1-3)-glucosyl transferase, involved in the synthesis of the cyclic beta-(1,3),(1,6)-D-glucan. 36% Glyco_trans_2. Pfam:PF00535; Glycos_transf_2. Signal peptide: present. TMhelix:9; Function unclear.
  
 
 0.621
azo1804
Membrane-anchored glycosyltransferase; Hypothetical 55.3 kDa protein in thcA 5region (ORF1); High confidence in function and specificity.
  
 
 0.604
azo3598
Hypothetical protein predicted by Glimmer/Critica; Possibly related to cell surface biosynthesis, ue to the location of he gene in a polysaccharide synthesis gene cluster.
  
 
 0.604
azo2326
Conserved hypothetical signaling protein.
       0.534
azo2314
Glycosyltransferase; Family membership.
  
    0.510
azo2318
Hypothetical membrane protein. homology to rsc2204 of R.solanacearum of 28% (trembl|Q8XXB2(SRS)). no domains predicted. no signal peptide. 10 TMHs.
     
 0.469
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.