STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azo2344Hypothetical secreted protein. No homology to the data bank. No domains predicted. No TMHs. Signal peptide present. (126 aa)    
Predicted Functional Partners:
bcp3
Conserved hypothetical bacterioferritin comigratory protein homolog. Homology to bp1307 of B. pertussis of 43% (trembl|Q7VYL2). Pfam: AhpC/TSA family. signal peptide. no TMHs; Family membership.
       0.766
azo2345
Conserved hypothetical secreted protein. Homology to RB5328 of Rhodopirellula baltica of 47% (trembl|Q7US09(SRS)). Signal Peptide present. No TMH reported Present. Has PF07394, Protein of unknown function (DUF1501);IPR010869;This family contains a number of hypothetical bacterial proteins of unknown function approximately 400 residues long; Conserved hypothetical protein.
       0.574
cc41
Putative cytochrome c4. Homology to cc4 of A. vinelandii of 34% (sprot|CYC4_AZOVI). Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems. Pfam: cytochrome C signal peptide no TMHs; Family membership.
       0.550
azo2346
Conserved hypothetical secreted protein. Homology to RB6288 of Rhodopirellula baltica of 30% (trembl|Q7UQJ4(SRS)). No domains predicted. No TMHs. Signal P reporting signal peptide; Conserved hypothetical protein.
       0.513
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.