STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azo2463Hypothetical secreted protein. no homology to the data bank. no domains predicted. signal peptide. no TMHs. (209 aa)    
Predicted Functional Partners:
azo2464
Conserved hypothetical protein. Homology to mll6883 of M.loti of 58% (trembl|Q987W1(SRS)). No domains predicted. No TMHs. No signal peptide.
       0.773
azo2465
Hypothetical protein. No homology to the data base. No domains predicted. No signal peptide. No TMHs.
       0.727
azo2462
Hypothetical secreted protein. No homology of the entire protein to the data bank. No domains predicted. No TMHs. Signal peptide present.
       0.686
azo2466
Hypothetical protein predicted by Glimmer/Critica. no homology to the data bank. no domains predicted. no signal peptide. no TMHs.
       0.676
azo2467
Conserved hypothetical protein. Homology to mll6881 of M.loti of 49% (trembl|Q987W3(SRS)). No domains predicted. No TMHs. No signal peptide.
       0.676
azo2461
Conserved hypothetical protein. Homology to mll6889 of M.loti. of 58% (trembl|Q987V8(SRS)). No domains predicted. No TMHs. No signal peptide.
       0.539
azo2460
Conserved hypothetical protein. Homology to mll6891 of Mesorhizobium loti of 37% (gi|14026496|dbj|BAB53093.1|). No domains predicted. No TMHs. No signal peptide.
       0.496
azo2459
Hypothetical protein, has very weak homolgy with hits in the database. NO motifs,domains, signal peptide or TMH present.
       0.453
azo2468
Conserved hypothetical transcriptional regulator. Homology to pp3544 of P. putida of 56% (trembl|Q88H21). InterPro: Aminotransferases class-I (IPR004838); Bacterial regulatory proteins, GntR family (IPR000524). Pfam: Bacterial regulatory proteins, gntR family; Aminotransferase class I and II. no signal peptide. no TMHs; Family membership.
       0.417
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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