Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dypPutative iron-dependent peroxidase; Getrichum candidum Dec1,Dye-decolorizing peroxidase,DyP, that lacks a typical heme-binding region. Responsible for the decoloration of dyes. DyP degraded phenolic compounds, such as 2,6-dimethoxyphenol and guaiacol. Hypothetical protein yfeX. ccoO: cytochrome c oxidase cbb3-type su; High confidence in function and specificity. (293 aa)    
Predicted Functional Partners:
azo2153
Conserved hypothetical secreted protein. Homology to PP2380 of P. putida of 47% (trembl:Q88KB0). Has PF04314, Protein of unknown function (DUF461);Putative membrane or periplasmic protein. Signal peptide present. No TMH reported present; Conserved hypothetical protein.
  
  
 0.839
waaP2
Lipopolysaccharide core biosynthesis protein rfaP. INVOLVED IN ATTACHMENT OF PHOSPHATE-CONTAINING SUBSTITUENTS TO THE INNER CORE. Specific function unclear.
  
     0.606
cca2
tRNA nucleotidyltransferase (EC 2.7.7.25) (tRNA adenylyltransferase) (tRNA CCA-pyrophosphorylase) (CCA-adding enzyme). This enzyme carries out synthesis of the tRNA CCA terminus without the direction of a template using the multiple accepting and donating subsites within its active site; Family membership.
       0.570
pheA
Bifunctional chorismate mutase/prephenate dehydratase P-protein, pheA,; High confidence in function and specificity.
     
 0.508
azo2038
Conserved hypothetical protein. Homology to RL074 of Pseudomonas aeruginosa of 34% (trembl:Q7WXY6). No domains predicted. No TMHs. No singal peptide.
  
     0.490
fleN
Hypothetical flagellar related protein FleN. Homology to fleN of Pseudomonas fluorescens of 27% (AAN03366). No domains predicted. No signal peptide. No TMHs.
  
     0.427
azo1238
Conserved hypothetical secreted protein. Homology to ebA2217 of Azoarcus sp. EbN1 of 32% (gnl|keqq|eba:ebA2217(KEGG)). C-terminus is not homolog to COG0644. signal peptide present. no TMHS; Conserved hypothetical protein.
  
     0.419
waaP3
Lipopolysaccharide core biosynthesis protein. INVOLVED IN ATTACHMENT OF PHOSPHATE-CONTAINING SUBSTITUENTS TO THE INNER CORE. Specific function unclear.
  
     0.416
azo3571
Conserved hypothetical protein; InterPro: Eukaryotic protein kinase. Might be related to lipopolysaccharide biosynthesis, due to the presence of the gene in a lipopolysaccharide gene cluster.
  
     0.410
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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