STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azo2652Conserved hypothetical membrane protein. Homology to CC0717 of Caulobacter crescentus of 66% (trembl|Q9AA89(SRS)). Also homology to noduline 21 of G. max of 33% (sprot|NO21_SOYBN(SRS)). Has PF01988,(IPR008217)Integral membrane protein DUF125;This family of predicted integral membrane proteins has no known function. However it does include P47818, that may have a role in regulating calcium levels. no signal peptide. 5 TMHs; Conserved hypothetical protein. (232 aa)    
Predicted Functional Partners:
azo2651
Conserved hypothetical protein. Homology to ebD23 of Azoarcus sp. EbN1 of 44% (gnl|keqq|eba:ebD23(KEGG)). No domains predicted. No TMHs. No signal peptide.
       0.566
pitA
Probable low-affinity phosphate transporter protein, PitA. Involved in phosphate transport depending on the proton motive force in E.coli. Similar to Pho-4, a cation-phosphate symporter in N. crassa. InterPro: Phosphate transporter family Signal peptide; High confidence in function and specificity.
       0.484
gltB
Ferredoxin-dependent glutamate synthase,; Specificity unclear.
  
  
 0.452
azo2650
Hypothetical secreted protein. no homology to the data bank. no domains predicted. signal peptide. TMH in signal peptide.
       0.421
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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