Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| azo2661 | azo2662 | azo2661 | azo2662 | Hypothetical protein which carries at the C-terminus a DnaJ N-terminal domain. InterPro: DnaJ N-terminal domain (IPR001623) Pfam: DnaJ domain no signal peptide no TMHs. | Conserved hypothetical protein. Homology to ebA2897 of Azoarcus sp. EbN1 of 61% (gnl|keqq|eba:ebA2897(KEGG)). Has PF01936, Protein of unknown function DUF88;(IPR002790). This highly conserved bacterial protein has no known function. The alignment contains many conserved aspartates, suggesting an enzymatic function such as an endonuclease or glycosyl hydrolase (Bateman A pers. obs). Coils2 Program predcit presence of Coiled Coil. No Signal Peptide or TMH present. | 0.420 |
| azo2661 | pheT | azo2661 | azo1084 | Hypothetical protein which carries at the C-terminus a DnaJ N-terminal domain. InterPro: DnaJ N-terminal domain (IPR001623) Pfam: DnaJ domain no signal peptide no TMHs. | Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) (Phenylalanine--tRNA ligase beta chain) (PheRS); High confidence in function and specificity; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.439 |
| azo2661 | trxA2 | azo2661 | azo2658 | Hypothetical protein which carries at the C-terminus a DnaJ N-terminal domain. InterPro: DnaJ N-terminal domain (IPR001623) Pfam: DnaJ domain no signal peptide no TMHs. | Putative thioredoxin-disulfide reductase. Homology to trxA (ECs4714) of E. coli of 27%. Participates in various redox reactions through the reversible oxidation of the active center dithiol to a dislufide. InterPro: Thioredoxin (IPR006662) no TMHs; Family membership. | 0.717 |
| azo2662 | azo2661 | azo2662 | azo2661 | Conserved hypothetical protein. Homology to ebA2897 of Azoarcus sp. EbN1 of 61% (gnl|keqq|eba:ebA2897(KEGG)). Has PF01936, Protein of unknown function DUF88;(IPR002790). This highly conserved bacterial protein has no known function. The alignment contains many conserved aspartates, suggesting an enzymatic function such as an endonuclease or glycosyl hydrolase (Bateman A pers. obs). Coils2 Program predcit presence of Coiled Coil. No Signal Peptide or TMH present. | Hypothetical protein which carries at the C-terminus a DnaJ N-terminal domain. InterPro: DnaJ N-terminal domain (IPR001623) Pfam: DnaJ domain no signal peptide no TMHs. | 0.420 |
| azo2662 | azo3284 | azo2662 | azo3284 | Conserved hypothetical protein. Homology to ebA2897 of Azoarcus sp. EbN1 of 61% (gnl|keqq|eba:ebA2897(KEGG)). Has PF01936, Protein of unknown function DUF88;(IPR002790). This highly conserved bacterial protein has no known function. The alignment contains many conserved aspartates, suggesting an enzymatic function such as an endonuclease or glycosyl hydrolase (Bateman A pers. obs). Coils2 Program predcit presence of Coiled Coil. No Signal Peptide or TMH present. | Conserved hypothetical protein. Homology to ne2229 of N. europaea of 38% (trembl|Q82SS7). no domains predicted. no signal peptide. no TMHs. | 0.411 |
| azo2662 | pheT | azo2662 | azo1084 | Conserved hypothetical protein. Homology to ebA2897 of Azoarcus sp. EbN1 of 61% (gnl|keqq|eba:ebA2897(KEGG)). Has PF01936, Protein of unknown function DUF88;(IPR002790). This highly conserved bacterial protein has no known function. The alignment contains many conserved aspartates, suggesting an enzymatic function such as an endonuclease or glycosyl hydrolase (Bateman A pers. obs). Coils2 Program predcit presence of Coiled Coil. No Signal Peptide or TMH present. | Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) (Phenylalanine--tRNA ligase beta chain) (PheRS); High confidence in function and specificity; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.425 |
| azo2662 | trmB | azo2662 | azo3968 | Conserved hypothetical protein. Homology to ebA2897 of Azoarcus sp. EbN1 of 61% (gnl|keqq|eba:ebA2897(KEGG)). Has PF01936, Protein of unknown function DUF88;(IPR002790). This highly conserved bacterial protein has no known function. The alignment contains many conserved aspartates, suggesting an enzymatic function such as an endonuclease or glycosyl hydrolase (Bateman A pers. obs). Coils2 Program predcit presence of Coiled Coil. No Signal Peptide or TMH present. | Conserved hypothetical tRNA (guanine-N7-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.478 |
| azo2662 | trxA2 | azo2662 | azo2658 | Conserved hypothetical protein. Homology to ebA2897 of Azoarcus sp. EbN1 of 61% (gnl|keqq|eba:ebA2897(KEGG)). Has PF01936, Protein of unknown function DUF88;(IPR002790). This highly conserved bacterial protein has no known function. The alignment contains many conserved aspartates, suggesting an enzymatic function such as an endonuclease or glycosyl hydrolase (Bateman A pers. obs). Coils2 Program predcit presence of Coiled Coil. No Signal Peptide or TMH present. | Putative thioredoxin-disulfide reductase. Homology to trxA (ECs4714) of E. coli of 27%. Participates in various redox reactions through the reversible oxidation of the active center dithiol to a dislufide. InterPro: Thioredoxin (IPR006662) no TMHs; Family membership. | 0.468 |
| azo2662 | yggH | azo2662 | azo1523 | Conserved hypothetical protein. Homology to ebA2897 of Azoarcus sp. EbN1 of 61% (gnl|keqq|eba:ebA2897(KEGG)). Has PF01936, Protein of unknown function DUF88;(IPR002790). This highly conserved bacterial protein has no known function. The alignment contains many conserved aspartates, suggesting an enzymatic function such as an endonuclease or glycosyl hydrolase (Bateman A pers. obs). Coils2 Program predcit presence of Coiled Coil. No Signal Peptide or TMH present. | tRNA (guanine-N(7)-)-methyltransferase, 29% identity to SwissProt;Q8EBX8. SwissProt;Q8Y1I7(25% Identity),Q8FE22(25% identity). Has PF02390,Methyltransf_4,Putative methyltransferase;IPR003358; This is a family of putative methyltransferases. The aligned region contains the GXGXG S-AdoMet binding site suggesting a putative methyltransferase activity. | 0.478 |
| azo3284 | azo2662 | azo3284 | azo2662 | Conserved hypothetical protein. Homology to ne2229 of N. europaea of 38% (trembl|Q82SS7). no domains predicted. no signal peptide. no TMHs. | Conserved hypothetical protein. Homology to ebA2897 of Azoarcus sp. EbN1 of 61% (gnl|keqq|eba:ebA2897(KEGG)). Has PF01936, Protein of unknown function DUF88;(IPR002790). This highly conserved bacterial protein has no known function. The alignment contains many conserved aspartates, suggesting an enzymatic function such as an endonuclease or glycosyl hydrolase (Bateman A pers. obs). Coils2 Program predcit presence of Coiled Coil. No Signal Peptide or TMH present. | 0.411 |
| azo3284 | pheT | azo3284 | azo1084 | Conserved hypothetical protein. Homology to ne2229 of N. europaea of 38% (trembl|Q82SS7). no domains predicted. no signal peptide. no TMHs. | Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) (Phenylalanine--tRNA ligase beta chain) (PheRS); High confidence in function and specificity; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.428 |
| pheT | azo2661 | azo1084 | azo2661 | Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) (Phenylalanine--tRNA ligase beta chain) (PheRS); High confidence in function and specificity; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | Hypothetical protein which carries at the C-terminus a DnaJ N-terminal domain. InterPro: DnaJ N-terminal domain (IPR001623) Pfam: DnaJ domain no signal peptide no TMHs. | 0.439 |
| pheT | azo2662 | azo1084 | azo2662 | Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) (Phenylalanine--tRNA ligase beta chain) (PheRS); High confidence in function and specificity; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | Conserved hypothetical protein. Homology to ebA2897 of Azoarcus sp. EbN1 of 61% (gnl|keqq|eba:ebA2897(KEGG)). Has PF01936, Protein of unknown function DUF88;(IPR002790). This highly conserved bacterial protein has no known function. The alignment contains many conserved aspartates, suggesting an enzymatic function such as an endonuclease or glycosyl hydrolase (Bateman A pers. obs). Coils2 Program predcit presence of Coiled Coil. No Signal Peptide or TMH present. | 0.425 |
| pheT | azo3284 | azo1084 | azo3284 | Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) (Phenylalanine--tRNA ligase beta chain) (PheRS); High confidence in function and specificity; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | Conserved hypothetical protein. Homology to ne2229 of N. europaea of 38% (trembl|Q82SS7). no domains predicted. no signal peptide. no TMHs. | 0.428 |
| trmB | azo2662 | azo3968 | azo2662 | Conserved hypothetical tRNA (guanine-N7-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | Conserved hypothetical protein. Homology to ebA2897 of Azoarcus sp. EbN1 of 61% (gnl|keqq|eba:ebA2897(KEGG)). Has PF01936, Protein of unknown function DUF88;(IPR002790). This highly conserved bacterial protein has no known function. The alignment contains many conserved aspartates, suggesting an enzymatic function such as an endonuclease or glycosyl hydrolase (Bateman A pers. obs). Coils2 Program predcit presence of Coiled Coil. No Signal Peptide or TMH present. | 0.478 |
| trxA2 | azo2661 | azo2658 | azo2661 | Putative thioredoxin-disulfide reductase. Homology to trxA (ECs4714) of E. coli of 27%. Participates in various redox reactions through the reversible oxidation of the active center dithiol to a dislufide. InterPro: Thioredoxin (IPR006662) no TMHs; Family membership. | Hypothetical protein which carries at the C-terminus a DnaJ N-terminal domain. InterPro: DnaJ N-terminal domain (IPR001623) Pfam: DnaJ domain no signal peptide no TMHs. | 0.717 |
| trxA2 | azo2662 | azo2658 | azo2662 | Putative thioredoxin-disulfide reductase. Homology to trxA (ECs4714) of E. coli of 27%. Participates in various redox reactions through the reversible oxidation of the active center dithiol to a dislufide. InterPro: Thioredoxin (IPR006662) no TMHs; Family membership. | Conserved hypothetical protein. Homology to ebA2897 of Azoarcus sp. EbN1 of 61% (gnl|keqq|eba:ebA2897(KEGG)). Has PF01936, Protein of unknown function DUF88;(IPR002790). This highly conserved bacterial protein has no known function. The alignment contains many conserved aspartates, suggesting an enzymatic function such as an endonuclease or glycosyl hydrolase (Bateman A pers. obs). Coils2 Program predcit presence of Coiled Coil. No Signal Peptide or TMH present. | 0.468 |
| yggH | azo2662 | azo1523 | azo2662 | tRNA (guanine-N(7)-)-methyltransferase, 29% identity to SwissProt;Q8EBX8. SwissProt;Q8Y1I7(25% Identity),Q8FE22(25% identity). Has PF02390,Methyltransf_4,Putative methyltransferase;IPR003358; This is a family of putative methyltransferases. The aligned region contains the GXGXG S-AdoMet binding site suggesting a putative methyltransferase activity. | Conserved hypothetical protein. Homology to ebA2897 of Azoarcus sp. EbN1 of 61% (gnl|keqq|eba:ebA2897(KEGG)). Has PF01936, Protein of unknown function DUF88;(IPR002790). This highly conserved bacterial protein has no known function. The alignment contains many conserved aspartates, suggesting an enzymatic function such as an endonuclease or glycosyl hydrolase (Bateman A pers. obs). Coils2 Program predcit presence of Coiled Coil. No Signal Peptide or TMH present. | 0.478 |