STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
creAPutative periplasmic protein [creA],59% identity (77% similarity) to SwissProt;P08367. TrEMBL; Q8XZD0(59% identity). Has PF05981, CreA protein;IPR010292, CreA: This family consists of several bacterial CreA proteins, the function of which is unknown; High confidence in function and specificity. (159 aa)    
Predicted Functional Partners:
azo2689
Conserved hypothetical protein. Homology to Daro03001159 of Dechloromonas aromatica of 50% (gi|41726181|ref|ZP_00152939.1|(NBCI ENTREZ)). Pfam: ProQ activator of osmoprotectant transpoter ProP. This family includes ProQ, which is required for full activation of the osmoprotectant transporter, ProQ, in Escherichia coli. no signal. peptide no TMHs.
       0.773
azo2690
Conserved hypothetical protein. Homology to ebA7139 of Azoarcus sp. EbN1 of 64% (gnl|keqq|eba:ebA7139(KEGG)). No domains predicted. No signal peptide. No TMH present.
       0.527
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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