Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| azo2709 | azo2710 | azo2709 | azo2710 | Hypothetical protein,42% similarity with TrEMBL;Q82T52. No Signal Peptide or TMH reported present; Family membership. | Conserved hypothetical flagellar related protein. Homology to NE2078 of Nitrosomonas europaea of 48% (CAD85989). Tirgfam: flhB_rel(TIGR). This group describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set. No TMHs. No signal peptide; Conserved hypothetical protein. | 0.916 |
| azo2709 | flaG | azo2709 | azo2705 | Hypothetical protein,42% similarity with TrEMBL;Q82T52. No Signal Peptide or TMH reported present; Family membership. | Probable flagellar protein; Protein flaG. Although these proteins are known to be important for flagellar their exact function is unknown TREMBL:Q82UA2: 56% identity, 79% similarity. InterPro:IPR005186; FlaG. Pfam:PF03646; FlaG L12: ribosomal protein L7/L12 Nonsecretory protein with low signal peptide probability (0.041): SignalP predicted Transmembrane helices 0; High confidence in function and specificity. | 0.795 |
| azo2709 | flgG | azo2709 | azo2735 | Hypothetical protein,42% similarity with TrEMBL;Q82T52. No Signal Peptide or TMH reported present; Family membership. | Flagellar basal-body rod protein flgG (Distal rod protein). The rod has been shown to consist of four different, yet evolutionary related proteins: in the distal portion of the rod there are about 26 subunits of protein flgG and in the proximal portion there are about six subunits each of proteins flgB, flgC, and flgF. These four proteins contain a highly conserved asparagine-rich domain at their N terminus. InterPro: Flagella basal body rod protein no signal peptide no TMHs; High confidence in function and specificity. | 0.856 |
| azo2709 | fliC3 | azo2709 | azo2704 | Hypothetical protein,42% similarity with TrEMBL;Q82T52. No Signal Peptide or TMH reported present; Family membership. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.733 |
| azo2709 | fliD | azo2709 | azo2706 | Hypothetical protein,42% similarity with TrEMBL;Q82T52. No Signal Peptide or TMH reported present; Family membership. | Flagellar hook-associated protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.899 |
| azo2709 | fliN | azo2709 | azo2724 | Hypothetical protein,42% similarity with TrEMBL;Q82T52. No Signal Peptide or TMH reported present; Family membership. | Flagellar motor switch protein fliN (Flagellar motor switch protein mopA) (Fragment). FliN is one of three proteins (FliG FliN FliM) that form a switch complex that is proposed to be located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins in addition to contacting components of the motor that determine the dirction of flagellar rotation (by similarity). InterPro: Surface presentation of antigens (SPOA) protein, Flagellar motor switch FliN protein Pfam: Surface presentation of antigens (SPOA) protein no signal peptide no TMHs; High confid [...] | 0.861 |
| azo2709 | fliR | azo2709 | azo2728 | Hypothetical protein,42% similarity with TrEMBL;Q82T52. No Signal Peptide or TMH reported present; Family membership. | Flagellar biosynthesis protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. | 0.731 |
| azo2709 | fliS | azo2709 | azo2707 | Hypothetical protein,42% similarity with TrEMBL;Q82T52. No Signal Peptide or TMH reported present; Family membership. | Flagellar protein fliS. The function of this protein in flagellar biosynthesis is unknown, but appears to be regulatory. Might be a chaperon for Flic. InterPro: Flagellar protein FliS fliS: flagellar protein FliS Pfam: Flagellar protein FliS no signal peptide no TMHs; Family membership. | 0.943 |
| azo2709 | fliT | azo2709 | azo2708 | Hypothetical protein,42% similarity with TrEMBL;Q82T52. No Signal Peptide or TMH reported present; Family membership. | Hypothetical lagellar related protein FliT. Homology to fliT of R. solanacearum of 27% (trembl|Q8XST2). no domains predicted. no signal peptide. no TMHs. | 0.668 |
| azo2709 | ycgR | azo2709 | azo2711 | Hypothetical protein,42% similarity with TrEMBL;Q82T52. No Signal Peptide or TMH reported present; Family membership. | Conserved hypothetical protein; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)-dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility. | 0.860 |
| azo2710 | azo2709 | azo2710 | azo2709 | Conserved hypothetical flagellar related protein. Homology to NE2078 of Nitrosomonas europaea of 48% (CAD85989). Tirgfam: flhB_rel(TIGR). This group describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set. No TMHs. No signal peptide; Conserved hypothetical protein. | Hypothetical protein,42% similarity with TrEMBL;Q82T52. No Signal Peptide or TMH reported present; Family membership. | 0.916 |
| azo2710 | flaG | azo2710 | azo2705 | Conserved hypothetical flagellar related protein. Homology to NE2078 of Nitrosomonas europaea of 48% (CAD85989). Tirgfam: flhB_rel(TIGR). This group describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set. No TMHs. No signal peptide; Conserved hypothetical protein. | Probable flagellar protein; Protein flaG. Although these proteins are known to be important for flagellar their exact function is unknown TREMBL:Q82UA2: 56% identity, 79% similarity. InterPro:IPR005186; FlaG. Pfam:PF03646; FlaG L12: ribosomal protein L7/L12 Nonsecretory protein with low signal peptide probability (0.041): SignalP predicted Transmembrane helices 0; High confidence in function and specificity. | 0.836 |
| azo2710 | flgG | azo2710 | azo2735 | Conserved hypothetical flagellar related protein. Homology to NE2078 of Nitrosomonas europaea of 48% (CAD85989). Tirgfam: flhB_rel(TIGR). This group describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set. No TMHs. No signal peptide; Conserved hypothetical protein. | Flagellar basal-body rod protein flgG (Distal rod protein). The rod has been shown to consist of four different, yet evolutionary related proteins: in the distal portion of the rod there are about 26 subunits of protein flgG and in the proximal portion there are about six subunits each of proteins flgB, flgC, and flgF. These four proteins contain a highly conserved asparagine-rich domain at their N terminus. InterPro: Flagella basal body rod protein no signal peptide no TMHs; High confidence in function and specificity. | 0.760 |
| azo2710 | fliC3 | azo2710 | azo2704 | Conserved hypothetical flagellar related protein. Homology to NE2078 of Nitrosomonas europaea of 48% (CAD85989). Tirgfam: flhB_rel(TIGR). This group describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set. No TMHs. No signal peptide; Conserved hypothetical protein. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.642 |
| azo2710 | fliD | azo2710 | azo2706 | Conserved hypothetical flagellar related protein. Homology to NE2078 of Nitrosomonas europaea of 48% (CAD85989). Tirgfam: flhB_rel(TIGR). This group describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set. No TMHs. No signal peptide; Conserved hypothetical protein. | Flagellar hook-associated protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.792 |
| azo2710 | fliN | azo2710 | azo2724 | Conserved hypothetical flagellar related protein. Homology to NE2078 of Nitrosomonas europaea of 48% (CAD85989). Tirgfam: flhB_rel(TIGR). This group describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set. No TMHs. No signal peptide; Conserved hypothetical protein. | Flagellar motor switch protein fliN (Flagellar motor switch protein mopA) (Fragment). FliN is one of three proteins (FliG FliN FliM) that form a switch complex that is proposed to be located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins in addition to contacting components of the motor that determine the dirction of flagellar rotation (by similarity). InterPro: Surface presentation of antigens (SPOA) protein, Flagellar motor switch FliN protein Pfam: Surface presentation of antigens (SPOA) protein no signal peptide no TMHs; High confid [...] | 0.622 |
| azo2710 | fliR | azo2710 | azo2728 | Conserved hypothetical flagellar related protein. Homology to NE2078 of Nitrosomonas europaea of 48% (CAD85989). Tirgfam: flhB_rel(TIGR). This group describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set. No TMHs. No signal peptide; Conserved hypothetical protein. | Flagellar biosynthesis protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. | 0.626 |
| azo2710 | fliS | azo2710 | azo2707 | Conserved hypothetical flagellar related protein. Homology to NE2078 of Nitrosomonas europaea of 48% (CAD85989). Tirgfam: flhB_rel(TIGR). This group describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set. No TMHs. No signal peptide; Conserved hypothetical protein. | Flagellar protein fliS. The function of this protein in flagellar biosynthesis is unknown, but appears to be regulatory. Might be a chaperon for Flic. InterPro: Flagellar protein FliS fliS: flagellar protein FliS Pfam: Flagellar protein FliS no signal peptide no TMHs; Family membership. | 0.846 |
| azo2710 | fliT | azo2710 | azo2708 | Conserved hypothetical flagellar related protein. Homology to NE2078 of Nitrosomonas europaea of 48% (CAD85989). Tirgfam: flhB_rel(TIGR). This group describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set. No TMHs. No signal peptide; Conserved hypothetical protein. | Hypothetical lagellar related protein FliT. Homology to fliT of R. solanacearum of 27% (trembl|Q8XST2). no domains predicted. no signal peptide. no TMHs. | 0.668 |
| azo2710 | ycgR | azo2710 | azo2711 | Conserved hypothetical flagellar related protein. Homology to NE2078 of Nitrosomonas europaea of 48% (CAD85989). Tirgfam: flhB_rel(TIGR). This group describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set. No TMHs. No signal peptide; Conserved hypothetical protein. | Conserved hypothetical protein; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)-dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility. | 0.776 |
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