STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
azo2848Putative AIG2-like protein. Homology to AIG2 of a. thaliana of 27% (sprot|AIG2_ARATH) AIG2 is an Arabidopsis proteins that exhibit RPS2- and avrRpt2-dependent induction early after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2. Pfam: AIG2-like family singal peptide no TMHs. (138 aa)    
Predicted Functional Partners:
azo2847
Hypothetical protein predicted by Glimmer/Critica. no homology to the data bank. no domains predicted. no signal peptide. no TMHs.
       0.773
pxpA
Conserved hypothetical protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
    
  0.530
prsA
Ribose-phosphate diphosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
    
  0.519
azo2846
Sigma-54-dependent transcriptional regulator; Similar to TREMBL:Q9F9U3 (44% identity); TREMBL:Q88H93 (39% identity); SWISSPROT:P28614 (35% identity). InterPro (IPR002078): Sigma-54 factor interaction domain. InterPro (IPR002197): Helix-turn-helix, Fis-type. InterPro (IPR003593): AAA ATPase. Pfam (PF02954): Bacterial regulatory protein, Fis family. Pfam (PF00158): Sigma-54 interaction domain. HTH reporting nucleic acid binding motif; High confidence in function and specificity.
       0.511
pepA
Cytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
     
  0.505
ggt
Ggt protein; Gamma-glutamyltranspeptidase catalyzes the transfer of the gamma-glutamyl moiety of glutathione to an acceptor that may be an amino acid, a peptide or water (forming glutamate). GGT plays a key role in the gamma-glutamyl cycle, a pathway for the synthesis and degradation of glutathione and drug and xenobiotic detoxification. Similar to trembl|Q88H30 (43%)and to trembl|Q8UJH0 (36%). TIGRfam (TIGR00066): Gamma-glutamyltranspeptidase Pfam (PF01019): Gamma-glutamyltranspeptidase SignalP reporting Signal peptide; Specificity unclear.
     
  0.502
ubiX
3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
     
  0.479
azo1277
Conserved hypothetical glutathione peroxidase. Homolgy to pp1874 pf P. putida of 66% (trembl|Q88LQ5) Glutathione peroxidase (GSHPx), an enzyme whose principal function is to protect against damage from endogenously-formed hydroxyperoxides, catalyses the reduction of hydroxyperoxides by glutathione Pfam: Glutatione peroxidase no signal peptide no TMHs; Family membership.
     
  0.420
azo3790
Conserved hypothetical glutathione peroxidase. Homology to gpwA of P. wisconsinensis of 52% (SWISSPROT:GPWA_PSEWI). Glutathione peroxidase (GSHPx), an enzyme whose principal function is to protect against damage from endogenously-formed hydroxyperoxides,catalyses the reduction of hydroxyperoxides by glutathione. InterPro: Glutathione peroxidase (IPR000889),Type I antifreeze protein (IPR000104). Pfam: Glutathione peroxidase. signal peptide. no TMHs; Family membership.
     
  0.420
azo2626
Hypothetical truncated transposase. Homology to tnp23 of Azoarcus sp. EbN1 of 86% (gnl|keqq|eba:ebA2478(KEGG)). No domains predicted. No signal peptide. No TMHs.,; Family membership.
  
     0.415
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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