STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azo2938Conserved hypothetical protein. Homology to OB2533 of O.iheyensis of 64% (trembl:Q8ENF0). Has PF05610,Protein of unknown function (DUF779);IPR008497;This family consists of several bacterial proteins of unknown function. No signal peptide or TMH present. (122 aa)    
Predicted Functional Partners:
aldA
Aldehyde dehydrogenase (NAD+). Homology to aldA of X. autotrophicus of 76% (trembl|O50203). Aldehyde dehydrogenases are enzymes which oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. InterPro: Aldehyde dehydrogenase family (IPR002086) Pfam: Aldehyde dehydrogenase family no TMHs; High confidence in function and specificity.
 
 
  0.874
cyt1
Probable cytochrome c-552 precursor. Homology to cyt of N. europaea of 50% (sprot|C552_NITEU). ELECTRON DONOR FOR CYTOCHROME CD1 IN NITRITE AND NITRATE RESPIRATION. InterPro: Cytochrome c class I (IPR003088); Cytochrome c, class ID (IPR002324); cytochrome c, class IC (IPR008168) Pfam: cytochrome c signal peptide no TMHs; High confidence in function and specificity.
       0.610
azo2940
Sigma-54 dependent transcriptional regulator; Similar to TREMBL:Q7P122 (29% identity); TREMBL:Q87YQ3 (29% identity); SWISSPROT:P28614 (28% identity). Pfam (PF00158): Sigma-54 interaction domain; Specificity unclear.
 
     0.443
acsB
Probable acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
   
  0.407
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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