STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azo3029Hypothetical secreted protein. No good homology over the entire length in DB. No domains predicted. Signal Peptide present. No TMH present. (321 aa)    
Predicted Functional Partners:
azo3028
Conserved hypothetical peptidase. Homology to rsc0445 of R. solanacearum of 50% (trembl|Q8Y291). Pfam: Peptidas_C39. Lantibiotic and non-lantibiotic bacteriocins are synthesised as precursor peptides containing N-terminal extensions (leader peptides) which are cleaved off during maturation. Most non-lantibiotics and also some lantibiotics have leader peptides of the so-called double-glycine type. These leader peptides share consensus sequences and also a common processing site with two conserved glycine residues in positions -1 and -2. The double- glycine-type leader peptides are unrel [...]
 
     0.942
azo3030
Conserved hypothetical secreted protein. Homology to RS04455 of R.solanacearum of 50% (tremble:Q8Y289). No domains predicted. Signal P reporting signal peptide present. No TMH reported present; Conserved hypothetical protein.
 
     0.799
azo3027
Conserved hypothetical secreted protein. Homology to RS04458 of Ralstonia solanacearum of 31% (tremble:Q8Y292). No domains predicted .Signal peptide reported. NO TMH present; Conserved hypothetical protein.
       0.772
azo2155
Conserved hypothetical secreted protein. Homology to rsc1270 of R. solanacearum of 44% (trembl|Q8XQF7(SRS)). no domains predicted .signal peptide present. no TMHs; Conserved hypothetical protein.
  
     0.621
azo2154
Conserved hypothetical secreted protein. 33% similarity to TrEMBL Q8XQF8 PROBABLE SIGNAL PEPTIDE PROTEIN [RS05314] [Ralstonia solanacearum (Pseudomonas solanacearum)]. No domains predicted. Signal P reporting signal peptide present. No TMH reported being present; Conserved hypothetical protein.
  
     0.617
azo3026
Conserved hypothetical secreted protein. Homology to Reut02004453 of Ralstonia metallidurans of 38% (gi|48768314|ref|ZP_00272664.1|(NBCI ENTREZ)). no domains predicted. signal peptide. no TMHs; Conserved hypothetical protein.
       0.558
azo0732
Conserved hypothetical secreted protein. Homology to rs03277 of R. solanacearum of 30% (TrEMBL:Q8Y2M5). No domains predicted. signal peptide. no TMHs; Conserved hypothetical protein.
  
     0.442
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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