Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
azo3321Conserved hypothetical membrane protein. Homology to rsc2383 of R. solanacearum of 31% (trembl|Q8XWT7(SRS)). no domains predicted .no signal peptide. 1 TMHs; Conserved hypothetical protein. (1303 aa)    
Predicted Functional Partners:
azo0969
Conserved hypothetical outer membrane protein. Homology to ne0930 of N. europaea of 44% (trembl|Q82VX0) Pfam: Bacterial surface protein signal peptide no TMHs; Family membership.
 
 0.997
oma
Outer membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
    
 0.871
azo2194
Conserved hypothetical membrane protein. Homology to rs04519 of R. solanacearum of 33% (trembl|Q8Y0Z7(SRS)). no domains predicted. no signal peptide. 1 TMHs; Conserved hypothetical protein.
  
  
 0.871
trpC
Indole-3-glycerol phosphate synthase (IGPS). catalytic activity:1-(2-carboxyphenylamino)-1-deoxy-d-ribulose 5-phosphate = 1-(indol-3-yl)glycerol 3-phosphate + co(2) + h(2)o. pathway: tryptophan biosynthesis; fourth step. InterPro: Indole-3-glycerol phosphate synthase; High confidence in function and specificity; Belongs to the TrpC family.
       0.789
trpD
1,4-alpha-glucan branching enzyme; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).
       0.780
yhjG
Outer membrane protein; Function unclear.
     
 0.767
trpG
Anthranilate synthase component II (Glutamine amido-transferase). catalytic activity: chorismate + l-glutamine = anthranilate + pyruvate + l-glutamate. pathway: tryptophan biosynthesis; first step. TIGRFAM: trpG_papA: glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthase; High confidence in function and specificity.
       0.745
azo3123
Conserved hypothetical secreted protein. Homology to ebA651 of Azoarcus sp. EbN1 of 37% (gnl|keqq|eba:ebA651(KEGG)). InterproterPro (IPR000694): Proline-rich region. SignalP reporting signal peptide. no TMHs.
  
  
 0.589
azo1520
Conserved hypothetical membrane protein. Homology to CV1748 of C. violaceum of 32% (trembl|Q7NX80(SRS)). No domains predicted. No signal peptide 11 TMHs; Conserved hypothetical protein.
  
     0.571
msrA
Putative peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
       0.554
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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