STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azo3472Conserved hypothetical secreted protein. Homology to RS02435 of R. solanarcearum of 43% (trembl|Q8XUH0(SRS)). No domains predicted. Signal Peptide present. No TMH reported present; Conserved hypothetical protein. (453 aa)    
Predicted Functional Partners:
vgrG
Probable vgr-related protein, 44% identity(54% similarity) to TrEMBL; Q7P238.TrEMBL;Q8XRU3(44% identity). Signal Peptide Present. Has SMART;SM00438,Repressor of transcription;IPR000967, Znf_NFX1;This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger: C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C,where X can be any amino acid, and numbers in brackets indicate the number of residues. The two position can be either his or cys. This domain is found in the human transcriptional repressor NK-X1, a repressor of HLA-DRA transcription; the Drosoph [...]
       0.574
azo3471
Conserved hypothetical protein. Homology to RS02436 of R.solanacearum of 41% (trembl:Q8XUG9). No domains predicted. No signal peptide present. No TMH reported present.
       0.574
azo3473
Conserved hypothetical protein. Homology to RS02435 of R. solanacearum of 47% (trembl:Q8XUH0). No domains predicted. No signal peptide. No TMHs.
      
0.535
azo3474
Conserved hypothetical secreted protein. Homology to RS02435 of R. solanarcearum of 44% (trembl|Q8XUH0(SRS)). No domains predicted. Signal Peptide present. No TMH reported present; Conserved hypothetical protein.
      
0.535
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.