STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azo3580Putative acyltransferase family protein; Catalysis of the reactions of the type: acyl-carrier + reactant = acyl-reactant + carrier. Entry name : Q888M0 InterPro : IPR002656; Acyl_transf_3. Identity: 227/677 (33%) Pfam PF01757; Acyl_transf_3; 1. Prediction: Non-secretory protein Signal peptide probability: 0.005(almost Yes) Number of predicted TMHs: 10; Family membership. (687 aa)    
Predicted Functional Partners:
nolU
Putative carbamoyltransferase. Homology to nolU of Rhizobium sp. NGR234 of 33% InterPro: Carbamoyltransferase Pfam: Carbamoyltransferase no signal peptide no TMHs; Family membership.
    
  0.664
azo3577
Hypothetical protein predicted by Glimmer/Critica; Possibly related to cell surface polysaccharide biosynthesis, due to the presence of the gene in a polysaccharide synthesis gene cluster.
 
     0.658
azo3578
Glycosyltransferase; Specificity unclear.
 
   
 0.657
azo3576
Conserved hypothetical protein.
     
 0.596
azo3575
Pyruvyltransferase; Family membership.
 
   
 0.593
capD
Putative capsular polysaccharide biosynthesis protein; 48% Polysac_CapD. Pfam:PF02719; Polysacc_synt_2; 1; High confidence in function and specificity.
     
 0.509
gumD
Putative glycosyltransferase; 43% Bact_transf. Pfam:PF02397; Bac_transf; 1. TMhelix:5; Specificity unclear.
     
 0.480
azo3193
Glycosyltransferase; Might transfer a sugar moiety directly to a lipd acceptor. Putative colanic biosynthesis UDP-glucose lipid carrier transferase. InterPro: Bacterial sugar transferase; Family membership.
     
 0.480
azo3574
Hypothetical membrane protein. Homology to pspto4986 of P. syringae of 28% (trembl|Q87VF1(SRS)) No domains predicted signal peptide 9 TMHs.
     
 0.471
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.