STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS04745.1DNA-binding transcriptional regulator, AcrR family. (208 aa)    
Predicted Functional Partners:
SDS04784.1
Putative oxidoreductase.
 
     0.616
SDS27742.1
DNA-binding transcriptional regulator, AcrR family.
  
     0.553
SDS04829.1
Drug resistance transporter, EmrB/QacA subfamily.
       0.534
SDS17986.1
DNA-binding transcriptional regulator, AcrR family.
  
     0.506
SDS42335.1
Regulatory protein, tetR family.
  
     0.465
SDR75794.1
Hypothetical protein.
  
     0.454
SDS02437.1
Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding.
  
     0.426
SDS80719.1
DNA-binding transcriptional regulator, AcrR family.
  
     0.412
Your Current Organism:
Brevibacterium sandarakinum
NCBI taxonomy Id: 629680
Other names: B. sandarakinum, Brevibacterium sandarakinum Kampfer et al. 2010, Brevibacterium sp. 01-Je-003, CCM 7649, DSM 22082, strain 01-Je-003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.