STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS17354.1Uncharacterized conserved protein, DUF1015 family. (405 aa)    
Predicted Functional Partners:
SDS17289.1
Cysteine synthase A.
       0.709
SDS17316.1
Predicted arabinose efflux permease, MFS family.
       0.709
SDS88898.1
Sensor histidine kinase inhibitor, KipI family.
    
  0.650
SDT14448.1
Phosphatase.
  
     0.582
SDS17260.1
Hypothetical protein.
       0.514
SDS70264.1
Hypothetical protein.
  
     0.509
Your Current Organism:
Brevibacterium sandarakinum
NCBI taxonomy Id: 629680
Other names: B. sandarakinum, Brevibacterium sandarakinum Kampfer et al. 2010, Brevibacterium sp. 01-Je-003, CCM 7649, DSM 22082, strain 01-Je-003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.