Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SDS83768.1Methyltransferase domain-containing protein. (217 aa)    
Predicted Functional Partners:
SDS83732.1
Hypothetical protein.
 
     0.954
SDS83799.1
Oxidoreductase molybdopterin binding domain-containing protein.
 
     0.954
SDS83909.1
dTDP-L-rhamnose 4-epimerase.
 
     0.954
SDS83691.1
Glycosyl transferase family 2.
 
     0.948
SDS83840.1
Hypothetical protein.
 
     0.919
SDS83648.1
Hypothetical protein.
 
   
 0.913
SDS83871.1
Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage.
 
   
 0.857
SDS83943.1
Hippurate hydrolase.
       0.518
nnrD
yjeF C-terminal region, hydroxyethylthiazole kinase-related; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. In the C-terminal section; belongs to the NnrD/CARKD family.
       0.515
SDS36427.1
Hypothetical protein.
  
     0.488
Your Current Organism:
Brevibacterium sandarakinum
NCBI taxonomy Id: 629680
Other names: B. sandarakinum, Brevibacterium sandarakinum Kampfer et al. 2010, Brevibacterium sp. 01-Je-003, CCM 7649, DSM 22082, strain 01-Je-003
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