Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDR69053.1 | SDR70215.1 | SAMN04489751_0083 | SAMN04489751_0133 | 2-oxoglutarate dehydrogenase E1 component. | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.912 |
SDR69053.1 | SDR97506.1 | SAMN04489751_0083 | SAMN04489751_0934 | 2-oxoglutarate dehydrogenase E1 component. | L-proline dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.950 |
SDR69053.1 | SDS19138.1 | SAMN04489751_0083 | SAMN04489751_1444 | 2-oxoglutarate dehydrogenase E1 component. | Glycine dehydrogenase (decarboxylating) alpha subunit /glycine dehydrogenase (decarboxylating) beta subunit; Belongs to the GcvP family. | 0.995 |
SDR69053.1 | SDS20353.1 | SAMN04489751_0083 | SAMN04489751_1471 | 2-oxoglutarate dehydrogenase E1 component. | FAD/FMN-containing dehydrogenase. | 0.741 |
SDR69053.1 | SDS28395.1 | SAMN04489751_0083 | SAMN04489751_1663 | 2-oxoglutarate dehydrogenase E1 component. | D-lactate dehydrogenase. | 0.741 |
SDR69053.1 | SDS89802.1 | SAMN04489751_0083 | SAMN04489751_3177 | 2-oxoglutarate dehydrogenase E1 component. | L-lactate dehydrogenase complex protein LldF. | 0.841 |
SDR69053.1 | SDT12568.1 | SAMN04489751_0083 | SAMN04489751_3842 | 2-oxoglutarate dehydrogenase E1 component. | Glutamate synthase (NADH) large subunit. | 0.968 |
SDR70215.1 | SDR69053.1 | SAMN04489751_0133 | SAMN04489751_0083 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 2-oxoglutarate dehydrogenase E1 component. | 0.912 |
SDR70215.1 | SDR97506.1 | SAMN04489751_0133 | SAMN04489751_0934 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | L-proline dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.888 |
SDR70215.1 | SDS19138.1 | SAMN04489751_0133 | SAMN04489751_1444 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Glycine dehydrogenase (decarboxylating) alpha subunit /glycine dehydrogenase (decarboxylating) beta subunit; Belongs to the GcvP family. | 0.715 |
SDR70215.1 | SDS20353.1 | SAMN04489751_0133 | SAMN04489751_1471 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | FAD/FMN-containing dehydrogenase. | 0.902 |
SDR70215.1 | SDS28395.1 | SAMN04489751_0133 | SAMN04489751_1663 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | D-lactate dehydrogenase. | 0.902 |
SDR70215.1 | SDS89802.1 | SAMN04489751_0133 | SAMN04489751_3177 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | L-lactate dehydrogenase complex protein LldF. | 0.788 |
SDR70215.1 | SDS89831.1 | SAMN04489751_0133 | SAMN04489751_3178 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | L-lactate dehydrogenase complex protein LldE. | 0.684 |
SDR70215.1 | SDS96402.1 | SAMN04489751_0133 | SAMN04489751_3364 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Glycolate oxidase iron-sulfur subunit. | 0.684 |
SDR70215.1 | SDT12568.1 | SAMN04489751_0133 | SAMN04489751_3842 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Glutamate synthase (NADH) large subunit. | 0.948 |
SDR97506.1 | SDR69053.1 | SAMN04489751_0934 | SAMN04489751_0083 | L-proline dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 2-oxoglutarate dehydrogenase E1 component. | 0.950 |
SDR97506.1 | SDR70215.1 | SAMN04489751_0934 | SAMN04489751_0133 | L-proline dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.888 |
SDR97506.1 | SDS19138.1 | SAMN04489751_0934 | SAMN04489751_1444 | L-proline dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Glycine dehydrogenase (decarboxylating) alpha subunit /glycine dehydrogenase (decarboxylating) beta subunit; Belongs to the GcvP family. | 0.915 |
SDR97506.1 | SDS20353.1 | SAMN04489751_0934 | SAMN04489751_1471 | L-proline dehydrogenase; Belongs to the aldehyde dehydrogenase family. | FAD/FMN-containing dehydrogenase. | 0.680 |
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