STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS89802.1L-lactate dehydrogenase complex protein LldF. (515 aa)    
Predicted Functional Partners:
SDS89769.1
Uncharacterised ACR, YkgG family COG1556.
 
 0.999
SDS89831.1
L-lactate dehydrogenase complex protein LldE.
 0.998
SDS19138.1
Glycine dehydrogenase (decarboxylating) alpha subunit /glycine dehydrogenase (decarboxylating) beta subunit; Belongs to the GcvP family.
    
 0.905
SDR97506.1
L-proline dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.904
SDS20353.1
FAD/FMN-containing dehydrogenase.
 
 0.901
SDS28395.1
D-lactate dehydrogenase.
 
 0.901
SDS96402.1
Glycolate oxidase iron-sulfur subunit.
 
 0.848
SDR69053.1
2-oxoglutarate dehydrogenase E1 component.
   
 
 0.841
SDT12568.1
Glutamate synthase (NADH) large subunit.
    
  0.834
SDR70215.1
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
   
 
  0.788
Your Current Organism:
Brevibacterium sandarakinum
NCBI taxonomy Id: 629680
Other names: B. sandarakinum, Brevibacterium sandarakinum Kampfer et al. 2010, Brevibacterium sp. 01-Je-003, CCM 7649, DSM 22082, strain 01-Je-003
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