Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SDS90920.12,5-diketo-D-gluconate reductase A. (273 aa)    
Predicted Functional Partners:
SDR96925.1
3,4-dihydroxyphenylacetate 2,3-dioxygenase.
   
  0.728
SDS68892.1
Trehalose 6-phosphatase.
   
   0.561
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
 0.510
SDS27043.1
Predicted oxidoreductase.
 
  0.487
SDS90951.1
PTS system N-acetylglucosamine-specific IIC component, Glc family.
       0.484
SDS60006.1
Hypothetical protein.
   
   0.474
SDT00003.1
Haloacid Dehalogenase Superfamily Class (subfamily) IIA.
     
  0.471
SDT09784.1
UDPglucose 6-dehydrogenase.
     
  0.461
SDS22220.1
Hypothetical protein.
   
   0.420
SDS51321.1
Trehalose 6-phosphatase.
   
   0.420
Your Current Organism:
Brevibacterium sandarakinum
NCBI taxonomy Id: 629680
Other names: B. sandarakinum, Brevibacterium sandarakinum Kampfer et al. 2010, Brevibacterium sp. 01-Je-003, CCM 7649, DSM 22082, strain 01-Je-003
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