Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDR71237.1 | SDR71261.1 | SAMN04489751_0174 | SAMN04489751_0175 | LPXTG-motif cell wall anchor domain-containing protein. | LPXTG-motif cell wall anchor domain-containing protein. | 0.439 |
SDR71237.1 | SDS97467.1 | SAMN04489751_0174 | SAMN04489751_3395 | LPXTG-motif cell wall anchor domain-containing protein. | SseB protein N-terminal domain-containing protein. | 0.869 |
SDR71237.1 | SDT03043.1 | SAMN04489751_0174 | SAMN04489751_3557 | LPXTG-motif cell wall anchor domain-containing protein. | Protein of unknown function. | 0.917 |
SDR71237.1 | SDT08719.1 | SAMN04489751_0174 | SAMN04489751_3724 | LPXTG-motif cell wall anchor domain-containing protein. | Hypothetical protein. | 0.747 |
SDR71261.1 | SDR71237.1 | SAMN04489751_0175 | SAMN04489751_0174 | LPXTG-motif cell wall anchor domain-containing protein. | LPXTG-motif cell wall anchor domain-containing protein. | 0.439 |
SDR71261.1 | SDS97467.1 | SAMN04489751_0175 | SAMN04489751_3395 | LPXTG-motif cell wall anchor domain-containing protein. | SseB protein N-terminal domain-containing protein. | 0.850 |
SDR71261.1 | SDT03043.1 | SAMN04489751_0175 | SAMN04489751_3557 | LPXTG-motif cell wall anchor domain-containing protein. | Protein of unknown function. | 0.925 |
SDR71261.1 | SDT08719.1 | SAMN04489751_0175 | SAMN04489751_3724 | LPXTG-motif cell wall anchor domain-containing protein. | Hypothetical protein. | 0.758 |
SDS82855.1 | SDS92894.1 | SAMN04489751_2979 | SAMN04489751_3263 | Cytochrome oxidase assembly protein ShyY1. | Protein of unknown function. | 0.709 |
SDS82855.1 | SDS97467.1 | SAMN04489751_2979 | SAMN04489751_3395 | Cytochrome oxidase assembly protein ShyY1. | SseB protein N-terminal domain-containing protein. | 0.936 |
SDS82855.1 | SDT14091.1 | SAMN04489751_2979 | SAMN04489751_3887 | Cytochrome oxidase assembly protein ShyY1. | Cytochrome oxidase assembly protein ShyY1. | 0.516 |
SDS82855.1 | secY | SAMN04489751_2979 | SAMN04489751_0574 | Cytochrome oxidase assembly protein ShyY1. | Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.804 |
SDS92894.1 | SDS82855.1 | SAMN04489751_3263 | SAMN04489751_2979 | Protein of unknown function. | Cytochrome oxidase assembly protein ShyY1. | 0.709 |
SDS92894.1 | SDS97467.1 | SAMN04489751_3263 | SAMN04489751_3395 | Protein of unknown function. | SseB protein N-terminal domain-containing protein. | 0.750 |
SDS97269.1 | SDS97467.1 | SAMN04489751_3389 | SAMN04489751_3395 | LysM domain-containing protein. | SseB protein N-terminal domain-containing protein. | 0.718 |
SDS97269.1 | hisA | SAMN04489751_3389 | SAMN04489751_3394 | LysM domain-containing protein. | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase. | 0.495 |
SDS97467.1 | SDR71237.1 | SAMN04489751_3395 | SAMN04489751_0174 | SseB protein N-terminal domain-containing protein. | LPXTG-motif cell wall anchor domain-containing protein. | 0.869 |
SDS97467.1 | SDR71261.1 | SAMN04489751_3395 | SAMN04489751_0175 | SseB protein N-terminal domain-containing protein. | LPXTG-motif cell wall anchor domain-containing protein. | 0.850 |
SDS97467.1 | SDS82855.1 | SAMN04489751_3395 | SAMN04489751_2979 | SseB protein N-terminal domain-containing protein. | Cytochrome oxidase assembly protein ShyY1. | 0.936 |
SDS97467.1 | SDS92894.1 | SAMN04489751_3395 | SAMN04489751_3263 | SseB protein N-terminal domain-containing protein. | Protein of unknown function. | 0.750 |
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