STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000382485_01908Unannotated protein. (143 aa)    
Predicted Functional Partners:
GCA_000382485_01907
Unannotated protein.
 
  
 0.926
GCA_000382485_01904
Unannotated protein.
 
   
 0.913
GCA_000382485_01906
Unannotated protein.
 
    0.910
GCA_000382485_01905
Unannotated protein.
       0.862
GCA_000382485_01903
Unannotated protein.
       0.768
GCA_000382485_00195
Unannotated protein.
   
 0.656
GCA_000382485_01852
Unannotated protein.
  
 
 0.601
GCA_000382485_01909
Unannotated protein.
       0.515
GCA_000382485_01910
Unannotated protein.
   
  0.500
GCA_000382485_00193
Unannotated protein.
   
 0.490
Your Current Organism:
Sphingomonas sp. Mn802worker
NCBI taxonomy Id: 629773
Other names: S. sp. Mn802worker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.