STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000382485_02104Unannotated protein. (486 aa)    
Predicted Functional Partners:
GCA_000382485_01001
Unannotated protein.
   
 
  0.757
GCA_000382485_01638
Unannotated protein.
  
 
  0.734
GCA_000382485_02542
Unannotated protein.
  
 
  0.734
GCA_000382485_01841
Unannotated protein.
   
  
 0.683
GCA_000382485_02016
Unannotated protein.
   
    0.659
GCA_000382485_00444
Unannotated protein.
   
   0.657
GCA_000382485_02073
Unannotated protein.
   
   0.657
GCA_000382485_02858
Unannotated protein.
  
     0.569
GCA_000382485_02105
Unannotated protein.
  
    0.541
GCA_000382485_02106
Unannotated protein.
       0.513
Your Current Organism:
Sphingomonas sp. Mn802worker
NCBI taxonomy Id: 629773
Other names: S. sp. Mn802worker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.