STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTTG_04270Uncharacterized protein. (290 aa)    
Predicted Functional Partners:
SUS1
Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...]
    
 0.774
PTTG_08230
SCA7 domain-containing protein.
    
 0.771
PTTG_06838
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.739
PTTG_28356
Uncharacterized protein.
    
 0.696
PTTG_05089
DH domain-containing protein.
    
 0.691
PTTG_04236
TFIID_20kDa domain-containing protein.
    
 0.687
PTTG_05638
Uncharacterized protein.
    
  0.677
PTTG_07846
Uncharacterized protein.
    
  0.664
PTTG_00666
Uncharacterized protein.
    
  0.664
PTTG_12709
TAF domain-containing protein.
    
 0.640
Your Current Organism:
Puccinia triticina
NCBI taxonomy Id: 630390
Other names: P. triticina 1-1 BBBD Race 1, Puccinia triticina 1-1 BBBD Race 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.