STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTTG_05854DNA excision repair protein ERCC-3. (889 aa)    
Predicted Functional Partners:
PTTG_03014
Uncharacterized protein.
   
 0.999
PTTG_01867
RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
   
 0.999
PTTG_01790
Uncharacterized protein.
    
 0.999
PTTG_25699
Uncharacterized protein.
    
 0.999
PTTG_04525
DNA repair helicase rad15.
   
 0.999
A0A0C4EM36
TFIIE beta domain-containing protein.
    
 0.994
PTTG_09181
HTH TFE/IIEalpha-type domain-containing protein.
   
 0.994
PTTG_12059
CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily.
    
 0.993
PTTG_09769
Uncharacterized protein.
    
 0.991
PTTG_01056
Uncharacterized protein.
    
 0.991
Your Current Organism:
Puccinia triticina
NCBI taxonomy Id: 630390
Other names: P. triticina 1-1 BBBD Race 1, Puccinia triticina 1-1 BBBD Race 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.