STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C4F8Z3Uncharacterized protein. (583 aa)    
Predicted Functional Partners:
A0A0C4EQY5
Uncharacterized protein.
   
 0.915
PTTG_25900
Uncharacterized protein.
   
 0.915
PTTG_07884
HDAC_interact domain-containing protein.
    
 0.896
PTTG_02833
HDAC_interact domain-containing protein.
    
 0.896
PTTG_05573
Hist_deacetyl domain-containing protein.
    
 0.894
PTTG_08313
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.894
PTTG_06331
Hist_deacetyl domain-containing protein.
    
 0.894
PTTG_04745
Uncharacterized protein.
    
 0.894
A0A0C4EPU7
tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]
    
 0.892
PTTG_26956
Uncharacterized protein.
    
 0.892
Your Current Organism:
Puccinia triticina
NCBI taxonomy Id: 630390
Other names: P. triticina 1-1 BBBD Race 1, Puccinia triticina 1-1 BBBD Race 1
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