STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTTG_29301Helicase ATP-binding domain-containing protein. (417 aa)    
Predicted Functional Partners:
PTTG_09553
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.752
A0A0C4ERQ2
Uncharacterized protein; Belongs to the actin family.
    
 0.740
PTTG_02539
Uncharacterized protein.
    
 
 0.730
PTTG_08705
Uncharacterized protein.
    
 0.707
A0A0C4EV47
Integrase catalytic domain-containing protein.
    
 0.696
A0A0C4ENX3
Uncharacterized protein.
   
 0.685
PTTG_03340
Uncharacterized protein; Belongs to the actin family.
   
  0.685
PTTG_25485
YL1_C domain-containing protein.
    
 0.684
PTTG_01056
Uncharacterized protein.
    
  0.640
PTTG_00995
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
  0.639
Your Current Organism:
Puccinia triticina
NCBI taxonomy Id: 630390
Other names: P. triticina 1-1 BBBD Race 1, Puccinia triticina 1-1 BBBD Race 1
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