STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTTG_07425Uncharacterized protein. (467 aa)    
Predicted Functional Partners:
A0A0C4F759
Uncharacterized protein.
   
 
 0.509
PTTG_28766
Uncharacterized protein.
   
 
 0.509
PTTG_09201
Uncharacterized protein.
    
 
 0.450
PTTG_02683
Uncharacterized protein.
    
 
 0.450
A0A0C4F5J1
Uncharacterized protein.
      
 0.445
PTTG_01687
Uncharacterized protein.
      
 0.445
PTTG_12017
Uncharacterized protein.
      
 0.445
Your Current Organism:
Puccinia triticina
NCBI taxonomy Id: 630390
Other names: P. triticina 1-1 BBBD Race 1, Puccinia triticina 1-1 BBBD Race 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.