STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTTG_11938Uncharacterized protein. (248 aa)    
Predicted Functional Partners:
A0A0C4ETR8
Uncharacterized protein.
    
 0.916
PTTG_28077
Uncharacterized protein.
    
 0.916
A0A0C4EMX6
B30.2/SPRY domain-containing protein.
    
 0.797
PTTG_02334
Uncharacterized protein.
    
 0.778
PTTG_02260
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.719
A0A0C4ET64
Uncharacterized protein.
    
 0.712
PTTG_05744
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.698
PTTG_11897
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.698
PTTG_07500
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.687
PTTG_00143
Uncharacterized protein.
    
 0.685
Your Current Organism:
Puccinia triticina
NCBI taxonomy Id: 630390
Other names: P. triticina 1-1 BBBD Race 1, Puccinia triticina 1-1 BBBD Race 1
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