STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTTG_09845Large subunit ribosomal protein L13Ae; Belongs to the universal ribosomal protein uL13 family. (198 aa)    
Predicted Functional Partners:
PTTG_04586
60S ribosomal protein L32.
  
 0.997
PTTG_00382
50S ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
  
 0.997
PTTG_00944
60S ribosomal protein.
  
 0.997
A0A0C4EK93
Uncharacterized protein.
  
 0.997
PTTG_01404
60S ribosomal protein L10, variant.
 
 0.997
A0A0C4ER72
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
 0.997
PTTG_03354
Large subunit ribosomal protein L7Ae.
  
 0.997
A0A0C4ERZ0
Uncharacterized protein.
  
 0.997
PTTG_04013
60S ribosomal protein L28, variant; Belongs to the universal ribosomal protein uL15 family.
  
 0.997
A0A0C4EVF8
Uncharacterized protein.
   
 0.997
Your Current Organism:
Puccinia triticina
NCBI taxonomy Id: 630390
Other names: P. triticina 1-1 BBBD Race 1, Puccinia triticina 1-1 BBBD Race 1
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