STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR90403.1Protein of unknown function. (154 aa)    
Predicted Functional Partners:
SDS19895.1
Hypothetical protein.
  
     0.660
SDR90336.1
Glutamate dehydrogenase.
       0.654
SDS60842.1
EcsC protein family protein.
  
     0.612
SDS12314.1
Hypothetical protein.
  
     0.552
SDS46207.1
Glyoxalase-like domain-containing protein.
  
     0.548
SDS02142.1
Hypothetical protein.
  
     0.473
SDS54476.1
Transcriptional regulator, AbiEi antitoxin, Type IV TA system.
  
     0.465
SDS59492.1
Transcriptional regulator, AbiEi antitoxin, Type IV TA system.
  
     0.454
SDR92507.1
Cell division protein FtsI/penicillin-binding protein 2.
  
     0.453
SDS60245.1
Hypothetical protein.
  
     0.436
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.