STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR91707.1Phytanoyl-CoA dioxygenase (PhyH). (255 aa)    
Predicted Functional Partners:
SDT39046.1
Ser/Thr protein kinase RdoA involved in Cpx stress response, MazF antagonist.
  
     0.765
SDT36035.1
Winged helix DNA-binding domain-containing protein.
  
     0.738
SDT34275.1
Hypothetical protein.
  
     0.714
SDS58244.1
Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family.
  
     0.710
SDS72158.1
Hypothetical protein.
  
     0.695
SDT45553.1
LPS sulfotransferase NodH; Catalyzes the sulfuryl group transfer from 3'- phosphoadenosine-5'-phosphosulfate (PAPS) to trehalose, leading to trehalose-2-sulfate (T2S).
  
     0.668
SDS04365.1
Multiple sugar transport system substrate-binding protein.
  
     0.664
SDS61686.1
MFS transporter, SET family, sugar efflux transporter.
  
     0.649
SDS14258.1
Predicted dehydrogenase.
  
     0.615
SDS75738.1
Protein of unknown function.
  
     0.605
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.