STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR92443.1GCN5-related N-acetyl-transferase. (100 aa)    
Predicted Functional Partners:
SDR92426.1
Protein N-acetyltransferase, RimJ/RimL family.
       0.773
SDR92395.1
Trans-aconitate 2-methyltransferase; Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate.
  
    0.696
nadE
NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
   
 
  0.652
SDS75319.1
Hypothetical protein.
   
    0.638
SDS14675.1
Hypothetical protein.
  
    0.566
SDR97137.1
CsbD-like; Belongs to the UPF0337 (CsbD) family.
   
    0.508
SDS99994.1
CsbD-like; Belongs to the UPF0337 (CsbD) family.
   
    0.508
SDR92367.1
Two-component system, OmpR family, response regulator MtrA.
       0.460
SDR92507.1
Cell division protein FtsI/penicillin-binding protein 2.
       0.454
SDR92303.1
Sporulation and spore germination.
       0.444
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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