STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR92557.12-dehydro-3-deoxygluconokinase. (322 aa)    
Predicted Functional Partners:
SDR92590.1
2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase.
 
 
 0.961
SDS07190.1
2-keto-3-deoxy-phosphogluconate aldolase.
 
 
 0.908
SDT45876.1
Ribulose-5-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.854
SDS92993.1
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
  
 0.794
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
 
 0.772
SDT08120.1
5-deoxy-glucuronate isomerase.
  
 
 0.770
SDT27184.1
Mannonate dehydratase.
  
  
  0.754
SDT34830.1
Hypothetical protein.
    
  0.700
SDR92507.1
Cell division protein FtsI/penicillin-binding protein 2.
       0.613
SDS01369.1
Tagatose 6-phosphate kinase.
 
 
 0.597
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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