STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR92747.1Transcriptional regulator, GntR family. (240 aa)    
Predicted Functional Partners:
SDS72027.1
GntR family transcriptional regulator.
  
     0.765
SDT32268.1
Transcriptional regulator, GntR family.
  
     0.759
SDR85344.1
GntR family transcriptional regulator.
  
     0.750
SDT08025.1
DNA-binding transcriptional regulator, GntR family.
  
     0.746
SDT28491.1
GntR family transcriptional regulator.
  
     0.502
SDR92693.1
Hypothetical protein.
       0.467
SDR92701.1
Hypothetical protein.
       0.467
SDS62171.1
AraC-type DNA-binding protein; Manually curated.
   
    0.456
SDT32292.1
Phosphonate transport system substrate-binding protein.
 
  
 0.440
SDT32335.1
Phosphonate transport system permease protein.
 
  
 0.422
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.