STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR93837.1Short-chain dehydrogenase. (344 aa)    
Predicted Functional Partners:
SDR93861.1
Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family.
     0.899
SDR93913.1
L-alanine-DL-glutamate epimerase.
 
     0.845
SDR93889.1
Pyruvate dehydrogenase (quinone); Belongs to the TPP enzyme family.
 
  
  0.752
SDR93806.1
Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
       0.737
SDT28843.1
[acyl-carrier-protein] S-malonyltransferase.
    
  0.712
SDS88701.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
 0.707
SDT05065.1
acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein.
  
 
  0.696
SDS95398.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
   
 
 0.642
SDR93946.1
FAD/FMN-containing dehydrogenase.
 
    0.509
SDS97453.1
Maltooligosyl trehalose synthase.
  
     0.460
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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