STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR98981.1Peroxiredoxin, Ohr subfamily. (142 aa)    
Predicted Functional Partners:
SDS70370.1
DNA-binding transcriptional regulator, MarR family.
    0.707
SDT38370.1
DNA-binding transcriptional regulator, MarR family.
  
    0.512
SDR93387.1
Starvation-inducible DNA-binding protein; Belongs to the Dps family.
  
  
 0.504
ffh
Signal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.
       0.453
SDR99028.1
ABC-type glycerol-3-phosphate transport system, substrate-binding protein.
       0.433
SDR99080.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
       0.433
SDR99113.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
       0.433
SDR99138.1
Catechol-2,3-dioxygenase.
       0.430
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.