node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
frr | rplD | SAMN04489812_0673 | SAMN04489812_3708 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.986 |
frr | rpsB | SAMN04489812_0673 | SAMN04489812_0676 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | 0.999 |
frr | rpsC | SAMN04489812_0673 | SAMN04489812_3713 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.984 |
frr | rpsE | SAMN04489812_0673 | SAMN04489812_3724 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.993 |
frr | rpsG | SAMN04489812_0673 | SAMN04489812_3686 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.988 |
frr | rpsJ | SAMN04489812_0673 | SAMN04489812_3706 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.996 |
frr | rpsM | SAMN04489812_0673 | SAMN04489812_3747 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.981 |
frr | rpsO | SAMN04489812_0673 | SAMN04489812_0608 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.991 |
frr | rpsP | SAMN04489812_0673 | SAMN04489812_0530 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.979 |
frr | rpsS | SAMN04489812_0673 | SAMN04489812_3711 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.988 |
rplD | frr | SAMN04489812_3708 | SAMN04489812_0673 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | 0.986 |
rplD | rpsB | SAMN04489812_3708 | SAMN04489812_0676 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | 0.999 |
rplD | rpsC | SAMN04489812_3708 | SAMN04489812_3713 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.999 |
rplD | rpsE | SAMN04489812_3708 | SAMN04489812_3724 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.999 |
rplD | rpsG | SAMN04489812_3708 | SAMN04489812_3686 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.999 |
rplD | rpsJ | SAMN04489812_3708 | SAMN04489812_3706 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.999 |
rplD | rpsM | SAMN04489812_3708 | SAMN04489812_3747 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.999 |
rplD | rpsO | SAMN04489812_3708 | SAMN04489812_0608 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.998 |
rplD | rpsP | SAMN04489812_3708 | SAMN04489812_0530 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.996 |
rplD | rpsS | SAMN04489812_3708 | SAMN04489812_3711 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.999 |