STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS03705.1DNA-binding transcriptional regulator GbsR, MarR family. (169 aa)    
Predicted Functional Partners:
SDS03818.1
Zinc carboxypeptidase.
 
     0.802
SDS03725.1
CubicO group peptidase, beta-lactamase class C family.
       0.780
SDS03670.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.773
SDS03852.1
Oligopeptide transport system substrate-binding protein.
 
     0.728
SDS03753.1
Oligopeptide transport system permease protein.
 
     0.635
SDS03791.1
Oligopeptide transport system permease protein.
 
     0.562
SDT21805.1
DNA-binding transcriptional regulator, IclR family.
  
     0.423
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.