STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS04399.1LacI family transcriptional regulator. (340 aa)    
Predicted Functional Partners:
SDS88701.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
    
   0.844
SDS77144.1
LacI family transcriptional regulator.
  
     0.774
SDS70237.1
DNA-binding transcriptional regulator, LacI/PurR family.
  
     0.773
SDT30187.1
DNA-binding transcriptional regulator, LacI/PurR family.
  
     0.772
SDS41414.1
Transcriptional regulator, LacI family.
  
     0.765
SDT40747.1
Glutamate synthase (NADH) large subunit.
    
   0.657
SDS04418.1
MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein.
       0.572
SDS88069.1
HxxPF-repeated domain-containing protein.
    
   0.563
SDS88876.1
Amino acid adenylation domain-containing protein.
    
   0.563
SDS04312.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
       0.467
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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