STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS07221.1Short-chain dehydrogenase. (288 aa)    
Predicted Functional Partners:
SDS88701.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.915
SDS88069.1
HxxPF-repeated domain-containing protein.
  
 
 0.798
SDS88876.1
Amino acid adenylation domain-containing protein.
  
 
 0.798
SDS87984.1
Amino acid adenylation domain-containing protein.
   
 0.794
SDS88294.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.691
SDS87865.1
HxxPF-repeated domain-containing protein.
  
 
 0.680
SDS07265.1
DNA-binding transcriptional regulator, AcrR family.
 
     0.627
SDT28843.1
[acyl-carrier-protein] S-malonyltransferase.
   
 
 0.555
SDR93269.1
Isopalmitoylresorcinol synthase.
  
 
  0.536
SDS88168.1
Thioester reductase domain-containing protein.
    
 0.455
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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