STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS24042.1Hypothetical protein. (347 aa)    
Predicted Functional Partners:
SDS23970.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit.
  
  0.891
SDS24085.1
Beta-galactosidase trimerisation domain-containing protein.
 
     0.706
SDS24010.1
Hypothetical protein.
 
    
0.653
SDS34507.1
Aminocarboxymuconate-semialdehyde decarboxylase.
  
     0.581
SDT33674.1
Amidohydrolase.
  
     0.550
SDS64291.1
Phytanoyl-CoA dioxygenase (PhyH).
  
    0.546
SDT39046.1
Ser/Thr protein kinase RdoA involved in Cpx stress response, MazF antagonist.
  
     0.541
SDR91707.1
Phytanoyl-CoA dioxygenase (PhyH).
  
     0.528
SDS72158.1
Hypothetical protein.
  
     0.501
SDT22751.1
Uncharacterized protein, RmlC-like cupin domain.
  
  
  0.498
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.