STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS24954.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (248 aa)    
Predicted Functional Partners:
SDS88701.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 0.974
SDS88168.1
Thioester reductase domain-containing protein.
 
 0.940
SDS88294.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 0.925
SDS87984.1
Amino acid adenylation domain-containing protein.
 
 0.909
SDS24920.1
D-threo-aldose 1-dehydrogenase.
     0.893
SDS24975.1
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).
  0.829
SDS88069.1
HxxPF-repeated domain-containing protein.
  
 0.821
SDS88876.1
Amino acid adenylation domain-containing protein.
 
 0.821
SDT40747.1
Glutamate synthase (NADH) large subunit.
     
 0.761
SDT28843.1
[acyl-carrier-protein] S-malonyltransferase.
 
 0.697
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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