STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS28187.1Arylsulfatase A. (450 aa)    
Predicted Functional Partners:
SDR84145.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
 
   0.754
SDT45819.1
Arylsulfatase A.
  
     0.680
SDS28026.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
       0.580
SDS28050.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
       0.580
SDS28090.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
       0.580
SDS28156.1
Transcriptional regulator, LacI family.
       0.580
SDS24373.1
NPCBM/NEW2 domain-containing protein.
 
   
  0.577
SDT21586.1
Dihydrodipicolinate synthase/N-acetylneuraminate lyase; Belongs to the DapA family.
    
  0.450
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.448
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.