STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS30565.1Nitroreductase. (226 aa)    
Predicted Functional Partners:
SDS04633.1
Siroheme synthase, N-terminal domain-containing protein.
    
 0.780
SDS30594.1
TatD DNase family protein.
       0.773
SDS45209.1
Uroporphyrinogen III methyltransferase / synthase.
  
 
 0.746
SDS01521.1
Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family.
    
  0.743
SDS30982.1
FMN reductase.
     
 0.741
SDR89578.1
Adenylyltransferase and sulfurtransferase.
    
  0.699
rsmA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
       0.609
SDT32886.1
Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
  
 
 0.608
SDS30536.1
Uncharacterized conserved protein YabE, contains G5 and tandem DUF348 domains.
       0.584
SDT25314.1
Ribosomal protein S12 methylthiotransferase accessory factor.
  
  
 0.581
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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