STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS32963.1Penicillin amidase. (830 aa)    
Predicted Functional Partners:
SDS21210.1
Penicillin amidase.
  
  
 
0.791
SDS88701.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
 
  
 0.649
SDS88876.1
Amino acid adenylation domain-containing protein.
 
    0.584
SDS32938.1
Protein of unknown function.
       0.545
SDS88069.1
HxxPF-repeated domain-containing protein.
  
    0.529
SDS33007.1
Hypothetical protein.
       0.465
SDS33057.1
Putative regulatory protein, FmdB family.
       0.460
SDS87984.1
Amino acid adenylation domain-containing protein.
  
    0.459
SDS32912.1
Ribosomal protein S18 acetylase RimI.
       0.443
SDS87948.1
MbtH protein.
 
    0.416
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.